CDS

Accession Number TCMCG047C10870
gbkey CDS
Protein Id GFP89435.1
Location join(475767..475857,475952..476067,476648..476704,476791..476946,477035..477119,477679..477769,477852..478016,482913..483032,483135..483210,483314..483485,483948..484061,484104..484705,484809..484999,485090..485255)
Organism Phtheirospermum japonicum
locus_tag PHJA_001087100

Protein

Length 733aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000190.1
Definition auxin response factor 2 [Phtheirospermum japonicum]
Locus_tag PHJA_001087100

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K14486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009835        [VIEW IN EMBL-EBI]
GO:0009836        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009911        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0046982        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATACTTCTGAAGTTTTGATAAAGGATTATAACGAGACCAACGGTCGTGGTCCCGGACCGGAGATGGGTAACGCCGGCGCCGGAAAAGTGGATGCTGAGAGGGCGTTATACACAGAGCTATGGAAGGCTTGTGCTGGTCCATTAGTGACTGTACCTCGTGAACAAGAGCTTGTTTTTTATTTTCCTCAGGGTCACATGGAACAGGCTGAACTGGACACAGATGAGGTGTTTGCCCAAGTTACTTTAATGCCCGAACCTAATCAAGATGAGAGTGCAGTGAAAAAGGAACCACTCCCCCCTCCATCGCCAAGTTTTCGCATCCATTCTTTTTGTAAAACTCTTACTGCATCAGATACGAGCACTCATGGTGGTTTCTCGGTGCTGAGACGGCATGCTGATGAGTGTCTGCCCCCACTGGACATGTCATTAGTACCTCCCACTCAAGAATTAGTGGCCAAGGATCTGCATGGAAATGAGTGGCGATTCAAACACATTTTTCGTGGTCAACCACGGAGACACCTCCTACAGAGTGGTTGGAGTGTCTTTGTTAGCTCAAAGAGGCTTGTTGCAGGGGATGCCTTCATATTTTTGAGGGGTGAGAATGGAGAGCTGCGGGCTGGAGTGAGGCGGGCAATGAGACATCAGGGTAATGCTCCTTCATCGGTCATATCTAGTCACAGCATGCATCTCGGTGTTCTGGCAACAGCTTCACATGCCATTCAGACCAAAACCATGTTCACCGTATATTACAAACCCAGAACAAGCCCAGAGGAGTTCATTGTTCCGTATGATCAATACATGGAGTATGTTAAAAACAATTATTCTATAGGAATGAGATTTAAAATGAGATTTGAAGGTGAAGAAGCTCCAGAACAGAGGTTTACTGGAACTATTGTTGGCATTGAAGACGCTGATTCGAAAAGGTGGCCCAAGTCTAAATGGAGATGCTTAAAGGTGCGGTGGGATGAAGTTTCATCAATTCCTCGACCAGAAAGAGTTTCACCCTGGAAAATAGAGCAAGCTCTGTCTCTTCCTGCATTGAATCCACTTCCATTGCCCAGATCAAAAAGGCCTCGACCGACTGCCTTGCCCTCCTCAACTGACTCTTCTGTTCTTCCCAAAGAAGACAATTTTGCTGAGAGCAATGAGTCAAGCACTTCGGCAAGGCCATCCTTGTGGACCCCTTCGTTAGACGATGATAAGATTGGAAATGCTTCTGCTTCAAGAAGATATGGATCGGATCTCTTATCAGGTTTCTGTTCGAAAGGTAATTCGCCCCATGATGTCAGTATGCCTCTTAGCGTCCAGTCAGTTTCAAACCGACTGGCTCAAGAGCATGAGTCGAAATTTAGCTTGGTTGGGAACAATTGGCCAACAATGCCTTCCGGTCTCTCTCTCAATTTGATGGATGCTAGATATGGTGCTTTTGGAGAATTTCCTATGATCACTGATCGTAGAGCTGAAAATCAGCAAGCAAAATTGTTAATGTCCCCACCTGTTTTTCCATACCTTCAAATGTCACCTGCTCAGTCGAAAGCTGTTATGCCGAAGTCTCTATTTGCCCAACAGCATGATGATACAAAGCCAAAGGAAGGGGACTGCAAGCTTTTTGGAATTTCCCTCTTAAGTAACAATGCACCAAGAGAGCCAGCAGGTTATAATATGCAGAATATGGCACATTCTCACCAATCCCTTGCAAATGAATCCGATCAAAGGTCTGATCAATCAAAGGACTCGAAAGCGGTCGATTATACAGTTTCCACTAGTGAGCAAGACAATCAATATCAAACGTTCCCTTCTTCAGCTAGAGATAGAGAAAGCAAAGGTCATACTTGTTCGACAGTTCATAAGCAGGGGTCTGCGCTTGGTAGGTCAGTGGATCTTGCCAAGTTTGACAATTATGACGAATTGATTTGTGAATTGGACAACATCTTCGAATTTAATGGTGAGCTGAAGGCGAGGAACAAGAATTGGCTAGTTGTGTATACTGATGATGAGGATGACATGATGCTTGTCGGAGATGATCCCTGGGAAGAATTTTGTGGCATGGTTCGTAAAATCTTAATCCTTACGAGAGAGGAGGTCCAGCGTATGAACCCGGGGCCCTTTAATTCAAAAGGAGAAACTTCATCAGTTGCCGAAGGCATAAATGCTAAAGAAGTGATGAATTCGTCATCATCGGGCCGAGAAAACTGCTAG
Protein:  
MDTSEVLIKDYNETNGRGPGPEMGNAGAGKVDAERALYTELWKACAGPLVTVPREQELVFYFPQGHMEQAELDTDEVFAQVTLMPEPNQDESAVKKEPLPPPSPSFRIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSLVPPTQELVAKDLHGNEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRAGVRRAMRHQGNAPSSVISSHSMHLGVLATASHAIQTKTMFTVYYKPRTSPEEFIVPYDQYMEYVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSKRWPKSKWRCLKVRWDEVSSIPRPERVSPWKIEQALSLPALNPLPLPRSKRPRPTALPSSTDSSVLPKEDNFAESNESSTSARPSLWTPSLDDDKIGNASASRRYGSDLLSGFCSKGNSPHDVSMPLSVQSVSNRLAQEHESKFSLVGNNWPTMPSGLSLNLMDARYGAFGEFPMITDRRAENQQAKLLMSPPVFPYLQMSPAQSKAVMPKSLFAQQHDDTKPKEGDCKLFGISLLSNNAPREPAGYNMQNMAHSHQSLANESDQRSDQSKDSKAVDYTVSTSEQDNQYQTFPSSARDRESKGHTCSTVHKQGSALGRSVDLAKFDNYDELICELDNIFEFNGELKARNKNWLVVYTDDEDDMMLVGDDPWEEFCGMVRKILILTREEVQRMNPGPFNSKGETSSVAEGINAKEVMNSSSSGRENC